Repository of Research and Investigative Information

Repository of Research and Investigative Information

Baqiyatallah University of Medical Sciences

A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata

(2017) A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata. Informatics in Medicine Unlocked. pp. 246-254. ISSN 23529148 (ISSN)

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Abstract

Cancer classification is an important problem in cancer diagnosis and treatment. One of the most effective methods in cancer classification is gene selection. However, selecting a subset of genes which increases the classification accuracy is an NP-Hard problem. A variety of algorithms were proposed for gene selection in cancer classification in previous studies. In this study, a hybrid meta-heuristic algorithm, which is an integration of Genetic Algorithm and Learning Automata (GALA), is proposed for this purpose. The time complexity of GALA is O(G.m.n3) and it has acceptable accuracy and performance on some well-known cancer datasets. To evaluate the performance of GALA, six different cancer datasets including Colon, ALLAML, SRBCT, MLL, Tumors₉ and Tumors₁₁ were selected. Based on the evaluation process, the GALA algorithm provided remarkable results on each dataset compared to some recently proposed algorithms. © 2017

Item Type: Article
Keywords: Biomarker Cancer classification Gene selection Genetic algorithm Learning automata
Divisions:
Page Range: pp. 246-254
Journal or Publication Title: Informatics in Medicine Unlocked
Journal Index: Scopus
Volume: 9
Identification Number: https://doi.org/10.1016/j.imu.2017.10.004
ISSN: 23529148 (ISSN)
Depositing User: مهندس مهدی شریفی
URI: http://eprints.bmsu.ac.ir/id/eprint/238

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