Repository of Research and Investigative Information

Repository of Research and Investigative Information

Baqiyatallah University of Medical Sciences

Mycobacterium tuberculosis genotyping using MIRU-VNTR typing

(2017) Mycobacterium tuberculosis genotyping using MIRU-VNTR typing. Journal of Mazandaran University of Medical Sciences. pp. 40-48. ISSN 17359279 (ISSN)

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Abstract

Background and purpose: Tuberculosis is among the leading causes of death from infectious diseases in the world. According to World Health Organization (WHO), the estimated rate of TB in Iran was 21 per 100,000 populations in 2015. The present study was designed to evaluate the genetic diversity and transmission dynamics of Mycobacterium tuberculosis in Tehran, Iran. Materials and methods: A total of 80 isolates of Mycobacterium tuberculosis was cultured from TB patients attending a teaching hospital in Tehran, Iran from January 2015 to December 2016. Standard 15-locus Mycobacterial Interspersed Repeat Units/Variable Numbers of Tandem Repeat (MIRU-VNTR) typing was applied to genotype clinical isolates. Results: There were 78 different VNTR profiles comprising 2 clusters and 76 unique patterns. The Hunter - Gaston discriminatory index (HGDI) was 0.990, indicating a high power of discrimination for MIRU-VNTR typing. The QUB26 and MTUB21 loci were designated as highly discriminative. Conclusion: The high genetic diversity among Mycobacterium tuberculosis isolates suggests that transmission may have been caused by different sources. © 2017, Mazandaran University of Medical Sciences. All rights reserved.

Item Type: Article
Keywords: Genotyping Iran MIRU-VNTR Mycobacterium tuberculosis Tehran Article bacterium isolate gene cluster gene locus genetic variability genotype genotyping technique nonhuman variable number of tandem repeat
Divisions:
Page Range: pp. 40-48
Journal or Publication Title: Journal of Mazandaran University of Medical Sciences
Journal Index: Scopus
Volume: 27
Number: 149
ISSN: 17359279 (ISSN)
Depositing User: مهندس مهدی شریفی
URI: http://eprints.bmsu.ac.ir/id/eprint/183

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