(2017) A Simple PCR-RFLP Method for Genotyping of IFNL4 rs368234815 Polymorphism in Patients With Chronic Hepatitis C. Laboratory Medicine. pp. 51-56. ISSN 0007-5027
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A Simple PCR-RFLP Method for Genotyping of IFNL4 rs368234815 Polymorphism in Patients With Chronic Hepatitis C.pdf Download (320kB) |
Abstract
Background: The IFNL4 rs368234815 polymorphism plays a prominent role in spontaneous and treatment-induced clearance of hepatitis C virus (HCV) infection. This study aimed to develop a polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method for assessment of rs368234815 polymorphism. Methods: We genotyped the rs368234815 polymorphism in 87 patients with chronic HCV by PCR sequencing and PCR-RFLP methods, simultaneously. Results: Genotyping of IFNL4 rs368234815 via PCR-RFLP was concordant with PCR sequencing in all 87 individuals (100). The analytical sensitivity and specificity of the developed PCR-RFLP method for genotyping of rs368234815 polymorphism were each 100. Among these patients with chronic HCV, the frequency of rs368234815 TT/TT, TT/triangle G, and triangle G/triangle G were 44.8, 37.9, and 17.3, respectively. Conclusions: The PCR-RFLP method that we developed is accurate, rapid, inexpensive, and easy to perform for genotyping of the IFNL4 rs368234815 polymorphism. This method can be used for clinical and research work.
Item Type: | Article |
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Keywords: | DNA sequencing genetic polymorphism hepatitis C human IFNL4 protein Polymerase Chain Reaction restriction fragment length polymorphism pegylated interferon ribavirin therapy genetic-variation il28b peginterferon combination telaprevir clearance alpha-2a 1b Medical Laboratory Technology |
Divisions: | |
Page Range: | pp. 51-56 |
Journal or Publication Title: | Laboratory Medicine |
Journal Index: | ISI |
Volume: | 48 |
Number: | 1 |
Identification Number: | https://doi.org/10.1093/labmed/lmw060 |
ISSN: | 0007-5027 |
Depositing User: | مهندس مهدی شریفی |
URI: | http://eprints.bmsu.ac.ir/id/eprint/4560 |
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